Set preferences for the Distribution across Proteome graph

You can temporarily customize the appearance of the Distribution across Proteome graph.

1. Open the Analysis Results tab. (See View Analysis Results.)

2. If needed, scroll down to the Graphs section. Then select the Distribution across Proteome tab.

3. Select  Settings on the graph to open the Preferences dialog.

4. Adjust the settings as you prefer.

   • Point Color and Point Highlight Color — Use the color picker to select these colors. (See Set color preferences in analysis results graphs.)

   • Point Size — Set the size of the point. The default is 8.

   • Page Chart Layout — Select an option for how many graphs appear on a page and the layout. For example, the 2 × 2 option shows four graphs per page, two down and two across.

   • Quantiles — Adjust the frequency distribution. The default quantiles are 0.25, 0.5, and 0.75.

     • To add a quantile, select Add and enter its value.

     • To modify existing quantiles, update the values in each field.

     • To delete a quantile, select  Delete.

   • Proteins — Annotate proteins of interest by entering their names, separated by commas (e.g., P35579,F5H7Y6,Q5VZ73). The dots representing the annotated proteins will appear on each graph in red with the protein names above.

5. Select Continue to apply the settings.